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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
4
ATAC-seq
1
Hi-C
Assay category
16
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
14
control
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
715
February, 2021
399
May, 2021
359
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
92
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
33
December, 2017
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
80
bam
65
bed narrowPeak
65
bigWig
bigBed narrowPeak
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
11
heart
5
kidney
5
pancreas
Project
21
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
16
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
audit.WARNING.category!
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
heart left ventricle
7
islet of Langerhans
4
1
kidney
5
heart
2
heart right ventricle
2
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