Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
3
MeRIP-seq
Assay category
25
DNA binding
Target of assay
84
histone
84
histone modification
43
broad histone mark
41
narrow histone mark
28
control
8
RNA binding protein
8
transcription factor
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
2
November, 2019
1
May, 2019
Available data
27
bam
17
fastq
2
bigWig
tagAlign
Organism
28
Homo sapiens
Biosample type
20
primary cell
5
cell line
3
in vitro differentiated cells
Organ
80
liver
50
pancreas
32
connective tissue
28
epithelium
23
adipose tissue
20
vasculature
19
blood vessel
18
heart
17
limb
12
brain
12
kidney
11
nerve
8
spleen
7
artery
7
embryo
6
blood
6
bodily fluid
4
musculature of body
2
vein
1
eye
Project
28
AMP
Genome assembly (visualization)
2
hg19
Lab
25
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
files.file_type!
cool
tagAlign
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 3 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
See all biosamples
Download