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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
309
ChIP-seq
Assay category
309
DNA binding
Target of assay
234
transcription factor
65
recombinant protein
60
control
32
RNA binding protein
21
histone
21
histone modification
12
narrow histone mark
broad histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
707
February, 2021
309
November, 2017
292
August, 2021
291
May, 2020
277
May, 2021
249
August, 2017
210
June, 2019
210
October, 2019
204
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
83
November, 2018
73
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
56
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
30
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
18
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
331
bam
301
fastq
274
bigWig
254
bed narrowPeak
253
bigBed narrowPeak
53
bed broadPeak
49
bigBed broadPeak
tagAlign
3
tar
Organism
309
Homo sapiens
Biosample type
291
cell line
9
primary cell
9
tissue
Organ
291
liver
18
brain
6
epithelium
6
vasculature
3
blood vessel
Project
309
AMP
Genome assembly (visualization)
251
hg19
209
GRCh38
Lab
309
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
files.file_type!
tagAlign
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
309 results
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Clear Filters
ChIP-seq
cell line
HepG2
291
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
layer of hippocampus
4
middle frontal area 46
3
cerebellum (Hemisphere)
2
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