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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
371
ChIP-seq
Assay category
371
DNA binding
Target of assay
233
transcription factor
71
control
65
recombinant protein
64
histone
64
histone modification
40
broad histone mark
32
RNA binding protein
24
narrow histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
546
February, 2021
371
November, 2017
283
May, 2020
236
October, 2019
233
May, 2021
214
June, 2019
118
May, 2019
106
August, 2017
83
December, 2017
79
April, 2019
78
July, 2019
75
November, 2018
49
August, 2021
37
February, 2018
34
December, 2018
30
January, 2019
23
October, 2018
11
July, 2018
11
October, 2017
10
April, 2018
10
March, 2020
6
November, 2019
6
November, 2020
5
December, 2019
2
June, 2018
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
371
Homo sapiens
Biosample type
293
cell line
69
tissue
9
primary cell
Organ
293
liver
78
brain
6
epithelium
6
vasculature
3
blood vessel
Project
371
AMP
Genome assembly (visualization)
263
GRCh38
259
hg19
Lab
371
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
pancreas
BIOSAMPLE
ASSAY
371 results
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Clear Filters
ChIP-seq
cell line
HepG2
293
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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