Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
Assay category
12
DNA accessibility
Date released
10
February, 2023
2
February, 2021
Available data
2981
bam
2758
bigWig
1408
tsv
1389
bed narrowPeak
1302
fastq
813
bigBed narrowPeak
381
tagAlign
201
bed broadPeak
bigBed broadPeak
155
bed bed3+
153
zippedFastqFolder
99
txt
24
bed bedMethyl
24
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
12
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
12
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent replicate
audit.WARNING.category!
inconsistent control read length
files.file_type!
bigBed broadPeak
organ_slims!
heart
kidney
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
Download