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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
710
histone modification
709
histone
420
transcription factor
361
narrow histone mark
347
broad histone mark
87
recombinant protein
80
RNA binding protein
22
chromatin remodeller
5
other context
5
other post-translational modification
Date released
9
November, 2017
6
January, 2019
2
December, 2017
2
December, 2018
2
November, 2018
1
August, 2017
Available data
22
bam
22
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
22
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
22
Homo sapiens
Biosample type
19
cell line
2
tissue
1
primary cell
Organ
12
liver
10
blood
10
bodily fluid
epithelium
Project
22
AMP
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
8
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
month_released!
October, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
cell line
GM12878
10
HepG2
9
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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