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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
290
ChIP-seq
Assay category
290
DNA binding
Target of assay
224
transcription factor
65
recombinant protein
63
histone
63
histone modification
40
broad histone mark
28
RNA binding protein
23
narrow histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
290
November, 2017
203
June, 2019
155
October, 2019
133
May, 2021
126
August, 2017
106
August, 2021
68
November, 2018
65
April, 2019
61
December, 2017
58
May, 2019
46
September, 2018
44
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
30
February, 2023
27
May, 2020
21
January, 2019
14
February, 2018
12
October, 2017
11
February, 2021
5
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
365
bam
307
bigWig
297
fastq
290
bed narrowPeak
289
bigBed narrowPeak
67
tagAlign
53
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
290
Homo sapiens
Biosample type
230
cell line
58
tissue
2
primary cell
Organ
230
liver
64
brain
4
epithelium
vasculature
2
blood vessel
Project
290
AMP
Genome assembly (visualization)
259
GRCh38
236
hg19
Lab
290
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
vasculature
BIOSAMPLE
ASSAY
290 results
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Clear Filters
ChIP-seq
cell line
HepG2
230
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
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primary cell
astrocyte of the cerebellum
2
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