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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
3
control
1
transcription factor
Date released
16
August, 2017
3
May, 2021
Available data
666
bam
606
bigWig
462
fastq
416
tsv
198
bed narrowPeak
80
zippedFastqFolder
79
bigBed narrowPeak
27
bed bed3+
20
bed broadPeak
19
tagAlign
6
bed bedMethyl
6
bedpe bed3+
6
bigBed bedMethyl
6
bigBed broadPeak
6
hic
6
txt
3
cool
Organism
12
Homo sapiens
Biosample type
16
tissue
3
in vitro differentiated cells
Organ
80
brain
75
liver
22
connective tissue
19
pancreas
15
musculature of body
8
adipose tissue
7
epithelium
6
artery
6
blood vessel
6
heart
6
vasculature
Project
19
AMP
Genome assembly (visualization)
14
hg19
8
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
lab.title!
Bing Ren, UCSD
month_released!
October, 2019
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
tissue
islet of Langerhans
9
pancreas
7
in vitro differentiated cells
pancreatic PP cell
3
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