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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
single cell RNA-seq
1
Hi-C
Assay category
4
DNA accessibility
3
Transcription
1
3D chromatin structure
Date released
649
February, 2021
399
May, 2021
395
August, 2017
382
November, 2017
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
4
bam
4
fastq
3
bigWig
3
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
8
Homo sapiens
Biosample type
5
tissue
3
primary cell
Organ
6
pancreas
1
epithelium
Project
8
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
month_released!
February, 2018
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
tissue
islet of Langerhans
4
1
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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