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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
12
ChIP-seq
Assay category
33
DNA accessibility
12
DNA binding
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
521
February, 2021
119
August, 2017
97
August, 2021
57
April, 2019
50
February, 2023
45
June, 2019
40
July, 2019
40
May, 2024
23
October, 2018
21
May, 2019
12
October, 2019
9
March, 2020
6
November, 2020
5
February, 2020
4
May, 2021
2
April, 2018
2
July, 2018
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
45
bam
42
bed narrowPeak
42
bigBed narrowPeak
42
bigWig
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
28
tissue
17
primary cell
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
45
AMP
Genome assembly (visualization)
42
GRCh38
39
hg19
Lab
45
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
organ_slims!
large intestine
BIOSAMPLE
ASSAY
45 results
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DNase-seq
ChIP-seq
tissue
heart
18
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
heart right ventricle
1
+ See 2 more…
primary cell
cardiac fibroblast
3
5
mesenchymal stem cell
7
brain pericyte
1
hepatic stellate cell
1
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