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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
234
transcription factor
80
histone
80
histone modification
71
control
65
recombinant protein
44
broad histone mark
36
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
196
October, 2019
189
August, 2017
140
May, 2021
92
May, 2019
77
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
29
October, 2018
27
May, 2020
24
December, 2017
20
August, 2021
19
June, 2019
14
February, 2018
12
October, 2017
November, 2019
7
January, 2019
3
March, 2020
Available data
68
bed narrowPeak
67
bam
67
bigWig
64
bigBed narrowPeak
56
tagAlign
12
bed broadPeak
7
fastq
6
bigBed broadPeak
Organism
80
Homo sapiens
Biosample type
72
tissue
5
cell line
3
primary cell
Organ
73
brain
4
liver
3
epithelium
3
pancreas
2
vasculature
1
blood vessel
Project
77
AMP
3
T1D
Genome assembly (visualization)
67
GRCh38
16
hg19
Lab
80
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
month_released!
November, 2019
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
+ See 2 more…
cell line
HepG2
4
EndoC_BH1
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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