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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
50
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
47
transcription factor
18
RNA binding protein
16
recombinant protein
3
control
3
other context
3
other post-translational modification
Date released
707
February, 2021
399
May, 2021
395
August, 2017
341
May, 2020
319
August, 2021
294
November, 2017
228
October, 2019
200
May, 2022
196
February, 2023
188
June, 2019
168
July, 2018
92
May, 2019
90
July, 2019
83
December, 2017
80
April, 2019
75
October, 2018
73
September, 2018
66
November, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
19
April, 2020
16
November, 2020
15
May, 2023
13
February, 2020
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
66
fastq
65
bam
61
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
1
csv
Organism
66
Homo sapiens
Biosample type
41
cell line
24
tissue
1
primary cell
Organ
48
liver
15
blood
bodily fluid
9
spleen
7
pancreas
brain
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
60
GRCh38
52
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
bodily fluid
brain
skeleton
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
omental fat pad
1
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primary cell
pancreatic cell
1
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