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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
DNase-seq
5
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
59
DNA binding
9
DNA accessibility
5
DNA methylation
1
Transcription
Target of assay
56
transcription factor
20
RNA binding protein
16
recombinant protein
3
control
2
chromatin remodeller
Date released
715
February, 2021
352
November, 2017
335
May, 2021
314
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
86
May, 2019
74
November, 2018
69
December, 2017
65
October, 2018
59
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
30
February, 2018
28
December, 2018
25
February, 2020
25
May, 2024
22
January, 2019
20
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
74
fastq
73
bam
69
bigWig
64
bed narrowPeak
64
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
csv
Organism
74
Homo sapiens
Biosample type
56
cell line
17
tissue
1
primary cell
Organ
48
liver
15
blood
15
bodily fluid
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
74
AMP
Genome assembly (visualization)
68
GRCh38
62
hg19
Lab
74
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
organ_slims!
spleen
stomach
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
15
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
omental fat pad
1
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primary cell
pancreatic cell
1
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