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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
3
DNase-seq
3
total RNA-seq
1
ATAC-seq
Assay category
7
DNA binding
4
DNA accessibility
3
Transcription
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
narrow histone mark
1
control
Date released
80
May, 2022
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
26
May, 2021
25
August, 2017
19
September, 2020
18
December, 2017
18
June, 2019
16
November, 2019
14
October, 2019
10
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
June, 2018
Available data
12
bam
10
bigWig
8
bed narrowPeak
3
tsv
1
bigBed narrowPeak
Organism
14
Homo sapiens
Biosample type
12
primary cell
2
cell line
Organ
86
brain
69
limb
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
0
large intestine
Project
14
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Liver fetal (hepatocyte)
1
cell line
glomerular visceral epithelial cell
1
1
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