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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
403
transcription factor
295
histone
295
histone modification
154
broad histone mark
140
narrow histone mark
123
control
89
recombinant protein
75
RNA binding protein
25
chromatin remodeller
2
other context
2
other post-translational modification
Date released
11
November, 2017
6
January, 2019
3
August, 2017
3
November, 2018
2
December, 2018
Available data
25
bam
25
bed narrowPeak
25
bigWig
25
fastq
23
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
22
cell line
2
in vitro differentiated cells
tissue
1
primary cell
Organ
13
liver
10
blood
10
bodily fluid
2
connective tissue
epithelium
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
13
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
biosample_type!
tissue
month_released!
July, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
cell line
HepG2
12
GM12878
10
in vitro differentiated cells
adipocyte
2
primary cell
skeletal muscle myoblast
1
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