Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
5
MeRIP-seq
Assay category
21
DNA binding
Target of assay
184
histone
184
histone modification
93
broad histone mark
91
narrow histone mark
26
control
18
transcription factor
10
RNA binding protein
5
nucleotide modification
Date released
12
August, 2017
8
May, 2021
5
November, 2020
August, 2021
1
October, 2017
Available data
bam
143
fastq
57
tagAlign
23
bigWig
8
bed bed3+
3
tsv
Organism
26
Homo sapiens
Biosample type
15
tissue
5
in vitro differentiated cells
3
cell line
3
primary cell
Organ
11
pancreas
connective tissue
5
adipose tissue
3
epithelium
3
liver
3
musculature of body
1
brain
Project
26
AMP
Genome assembly (visualization)
3
hg19
Lab
13
AMP-T2D consortium
8
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bam
month_released!
August, 2021
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
liver
3
skeletal muscle tissue
3
brain
1
in vitro differentiated cells
embryonic stem cell
5
cell line
EndoC_BH1
3
primary cell
CD8-positive, alpha-beta T cell
3
Download