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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
7
DNase-seq
3
WGBS
1
single cell RNA-seq
Assay category
66
DNA binding
7
DNA accessibility
3
DNA methylation
1
Transcription
Target of assay
60
transcription factor
20
RNA binding protein
16
recombinant protein
6
control
3
chromatin remodeller
3
other context
3
other post-translational modification
Date released
683
February, 2021
402
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
222
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
98
July, 2019
96
May, 2022
94
December, 2017
80
April, 2019
77
November, 2018
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
77
fastq
76
bam
69
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
77
Homo sapiens
Biosample type
57
cell line
19
tissue
1
primary cell
Organ
49
liver
15
blood
15
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
77
AMP
Genome assembly (visualization)
69
GRCh38
64
hg19
Lab
77
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
files.file_type!
hdf5
month_released!
April, 2018
organ_slims!
pancreas
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2
41
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
primary cell
pancreatic cell
1
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