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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
27
ChIP-seq
8
ATAC-seq
Assay category
41
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
Date released
41
June, 2019
13
August, 2017
8
February, 2021
6
May, 2019
Available data
126
bigWig
123
bam
89
txt
68
bed narrowPeak
67
tsv
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
4
bed bed3
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
Organism
68
Homo sapiens
Biosample type
59
tissue
9
primary cell
Organ
433
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
68
AMP
Genome assembly (visualization)
68
hg19
54
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
files.file_type!
vcf
BIOSAMPLE
ASSAY
68 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
muscle of leg
13
6
muscle of arm
17
skeletal muscle tissue
13
distal epiphysis
1
distal epiphysis of femur
1
+ See 8 more…
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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