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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
850
histone modification
849
histone
461
transcription factor
428
narrow histone mark
420
broad histone mark
RNA binding protein
88
recombinant protein
28
chromatin remodeller
5
other context
5
other post-translational modification
Date released
7
November, 2017
2
August, 2017
2
December, 2017
2
December, 2018
2
January, 2019
2
November, 2018
Available data
17
bam
17
bed narrowPeak
17
bigWig
17
fastq
15
bigBed narrowPeak
3
bed broadPeak
3
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
13
cell line
2
in vitro differentiated cells
2
tissue
Organ
10
liver
5
blood
5
bodily fluid
2
connective tissue
Project
17
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
17
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
8
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
8
GM12878
5
in vitro differentiated cells
adipocyte
2
tissue
liver
2
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