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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
Assay category
3
3D chromatin structure
Date released
12
March, 2020
3
October, 2019
3
October, 2022
2
August, 2021
2
November, 2019
1
August, 2018
Available data
77
bam
38
bigWig
22
bed narrowPeak
16
tsv
12
bigBed narrowPeak
9
tagAlign
8
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
4
hic
3
bedpe bed3+
1
hdf5
1
tar
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
tissue
Organ
1
heart
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
organ_slims!
lung
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
3 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
tissue
heart
1
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