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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
256
ChIP-seq
Assay category
256
DNA binding
Target of assay
193
transcription factor
66
recombinant protein
59
control
28
RNA binding protein
7
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
1
other context
1
other post-translational modification
Date released
256
November, 2017
103
August, 2017
94
December, 2017
70
November, 2018
39
February, 2018
39
February, 2021
39
February, 2023
35
December, 2018
30
January, 2019
23
October, 2018
22
September, 2020
12
October, 2017
11
July, 2018
10
April, 2018
5
January, 2018
2
June, 2018
1
August, 2018
1
September, 2018
Available data
388
bam
330
bigWig
320
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
bigBed broadPeak
3
tar
Organism
256
Homo sapiens
Biosample type
253
cell line
3
primary cell
Organ
253
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
256
AMP
Genome assembly (visualization)
207
hg19
171
GRCh38
Lab
256
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
8
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bigBed broadPeak
organ_slims!
pancreas
BIOSAMPLE
ASSAY
256 results
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Clear Filters
ChIP-seq
cell line
HepG2
253
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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