Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
1016
histone modification
1015
histone
513
narrow histone mark
506
transcription factor
501
broad histone mark
343
control
111
RNA binding protein
89
recombinant protein
28
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
11
November, 2017
6
January, 2019
3
August, 2017
3
December, 2017
3
November, 2018
2
December, 2018
Available data
28
bam
28
bed narrowPeak
28
bigWig
28
fastq
26
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
22
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
15
liver
10
blood
10
bodily fluid
2
connective tissue
1
epithelium
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
13
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
month_released!
April, 2018
April, 2020
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
12
GM12878
10
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
Download