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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
105
Transcription
3
DNA accessibility
Date released
715
February, 2021
410
August, 2017
402
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
84
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
85
fastq
52
bigWig
49
bam
49
tsv
19
zippedFastqFolder
Organism
108
Homo sapiens
Biosample type
102
primary cell
6
tissue
Organ
58
pancreas
52
epithelium
2
connective tissue
Project
59
HPAP
49
AMP
Genome assembly (visualization)
52
GRCh38
49
hg19
Lab
59
Klaus Kaestner, Upenn
49
AMP-T2D consortium
audit.WARNING.category!
inconsistent control run_type
month_released!
February, 2023
BIOSAMPLE
ASSAY
108 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
3
15
2
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
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tissue
islet of Langerhans
6
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