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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
10
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
6
November, 2018
4
January, 2019
3
December, 2018
1
March, 2020
1
October, 2017
Available data
14
bam
14
bigWig
14
fastq
12
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
820
pancreas
616
connective tissue
615
liver
455
adipose tissue
445
epithelium
333
heart
327
kidney
188
vasculature
184
blood vessel
159
bone element
138
brain
126
artery
90
limb
77
musculature of body
62
blood
62
bodily fluid
57
eye
24
nerve
22
embryo
lung
18
ureter
16
skeleton
15
spleen
14
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
15
AMP-T2D consortium
audit.WARNING.category!
inconsistent control run_type
organ_slims!
lung
target.investigated_as!
control
narrow histone mark
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
10
2
1
1
1
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