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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 3ChIP-seq
  • 1Hi-C
Assay category
  • 3DNA binding
  • 13D chromatin structure
Target of assay
  • 3histone
  • 3histone modification
  • 2broad histone mark
  • 1narrow histone mark
Date released
  • 3August, 2017
  • 1October, 2019
Available data
  • 4bigWig
  • 3bam
  • 3bed narrowPeak
  • 3bigBed narrowPeak
  • 3fastq
  • 2bed broadPeak
  • 2tagAlign
  • 1bed bed3+
  • 1bigBed broadPeak
  • 1hdf5
Organism
  • 3Homo sapiens
Biosample type
  • 2primary cell
  • 1cell line
  • 1tissue
Organ
  • 2pancreas
Project
  • 4AMP
Genome assembly (visualization)
  • 4GRCh38
  • 4hg19
Lab
  • 4AMP-T2D consortium
Audit category:
  • 56inconsistent control read length
  • 9inconsistent control run_type
  • 4inconsistent assembly
BIOSAMPLE
ASSAY

4 results

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ChIP-seq
Hi-C
primary cell
skeletal muscle myoblast2
cell line
Panc11
tissue
pancreas1
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