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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
histone
22
histone modification
14
transcription factor
12
narrow histone mark
10
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
7
November, 2017
6
August, 2017
December, 2017
1
November, 2018
Available data
14
bam
14
bed narrowPeak
14
bigWig
14
fastq
8
bigBed narrowPeak
4
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
8
cell line
6
in vitro differentiated cells
Organ
8
liver
6
connective tissue
Project
14
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
21
inconsistent control read length
inconsistent control run_type
1
inconsistent assembly
audit.WARNING.category!
inconsistent control run_type
month_released!
December, 2017
October, 2018
target.investigated_as!
histone
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
cell line
HepG2
8
in vitro differentiated cells
adipocyte
6
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