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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
20
histone
20
histone modification
11
narrow histone mark
10
transcription factor
broad histone mark
2
chromatin remodeller
Date released
13
August, 2017
6
December, 2017
1
February, 2018
1
October, 2018
Available data
21
bam
21
bed narrowPeak
21
bigWig
21
fastq
5
bed bed3+
4
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
cell line
12
in vitro differentiated cells
5
primary cell
3
tissue
1
stem cell
Organ
6
connective tissue
6
pancreas
5
epithelium
2
embryo
1
liver
Project
21
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
21
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
target.investigated_as!
RNA binding protein
broad histone mark
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
2
Hepatic endoderm
1
Posterior foregut
1
pancreatic endoderm
1
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
body of pancreas
1
liver
1
pancreas
1
stem cell
hESC
1
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