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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
15
histone
15
histone modification
10
broad histone mark
6
transcription factor
narrow histone mark
2
RNA binding protein
1
chromatin remodeller
Date released
8
November, 2017
4
August, 2017
4
December, 2017
Available data
39
bam
39
bigWig
39
fastq
38
bed narrowPeak
23
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
Organism
16
Homo sapiens
Biosample type
8
cell line
8
in vitro differentiated cells
stem cell
Organ
8
liver
4
connective tissue
1
embryo
Project
16
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
16
inconsistent control read length
3
inconsistent assembly
biosample_type!
stem cell
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
cell line
HepG2
8
in vitro differentiated cells
adipocyte
4
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
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