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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
15
transcription factor
11
chromatin remodeller
11
histone
11
histone modification
6
RNA binding protein
6
broad histone mark
narrow histone mark
1
recombinant protein
Date released
16
November, 2017
5
November, 2018
Available data
21
bam
21
bigWig
21
fastq
20
bed narrowPeak
20
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
Organism
21
Homo sapiens
Biosample type
21
cell line
15
in vitro differentiated cells
3
tissue
1
stem cell
Organ
21
liver
Project
21
AMP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
21
inconsistent control read length
8
inconsistent control run_type
1
inconsistent assembly
organ_slims!
limb
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
cell line
HepG2
21
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