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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
16
histone
16
histone modification
15
transcription factor
chromatin remodeller
broad histone mark
8
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
8
November, 2017
3
August, 2017
1
October, 2018
Available data
28
bam
28
bigWig
28
fastq
27
bed narrowPeak
12
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
bed bed3+
5
tagAlign
Organism
12
Homo sapiens
Biosample type
8
cell line
3
tissue
1
primary cell
Organ
9
liver
2
pancreas
Project
12
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
12
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
broad histone mark
chromatin remodeller
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
cell line
HepG2
8
tissue
body of pancreas
1
liver
1
pancreas
1
primary cell
skeletal muscle myoblast
1
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