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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
Assay category
24
DNA binding
Target of assay
31
histone
31
histone modification
25
transcription factor
16
narrow histone mark
15
broad histone mark
13
chromatin remodeller
6
RNA binding protein
recombinant protein
Date released
9
November, 2017
6
August, 2017
5
November, 2018
4
December, 2017
Available data
24
bam
24
bed narrowPeak
24
bigWig
24
fastq
14
bigBed narrowPeak
4
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
14
cell line
10
in vitro differentiated cells
Organ
14
liver
6
connective tissue
1
embryo
Project
24
AMP
Genome assembly (visualization)
24
hg19
22
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
24
inconsistent control read length
8
inconsistent control run_type
files.file_type!
hdf5
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
cell line
HepG2
14
in vitro differentiated cells
adipocyte
6
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
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