Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
37
DNA binding
Target of assay
19
histone
19
histone modification
18
transcription factor
11
broad histone mark
11
chromatin remodeller
8
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
21
November, 2017
August, 2017
8
December, 2017
5
November, 2018
2
February, 2018
1
October, 2018
Available data
37
bam
37
bigWig
37
fastq
35
bed narrowPeak
25
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
5
bed bed3+
Organism
37
Homo sapiens
Biosample type
26
cell line
8
in vitro differentiated cells
2
stem cell
1
tissue
Organ
26
liver
embryo
1
epithelium
1
pancreas
Project
37
AMP
Genome assembly (visualization)
37
hg19
33
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
37
inconsistent control read length
8
inconsistent control run_type
1
inconsistent assembly
month_released!
April, 2019
August, 2017
organ_slims!
embryo
pericardium
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
26
in vitro differentiated cells
definitive endodermal cell
4
Posterior foregut
2
primitive gut cell
2
stem cell
hESC
2
tissue
body of pancreas
1
Download