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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
31
histone
31
histone modification
transcription factor
narrow histone mark
15
broad histone mark
13
chromatin remodeller
6
RNA binding protein
1
recombinant protein
Date released
6
November, 2017
5
December, 2017
3
August, 2017
1
February, 2018
Available data
15
bam
15
bigWig
15
fastq
14
bed narrowPeak
8
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
5
bed bed3+
Organism
15
Homo sapiens
Biosample type
6
cell line
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
6
liver
3
pancreas
1
embryo
Project
15
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent control read length
3
inconsistent assembly
month_released!
January, 2021
organ_slims!
bone marrow
target.investigated_as!
narrow histone mark
transcription factor
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
cell line
HepG2
6
in vitro differentiated cells
definitive endodermal cell
2
Posterior foregut
1
pancreatic endoderm
1
primitive gut cell
1
tissue
pancreas
3
stem cell
hESC
1
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