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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
29
histone
29
histone modification
transcription factor
15
narrow histone mark
14
broad histone mark
chromatin remodeller
6
RNA binding protein
1
recombinant protein
Date released
11
November, 2017
10
August, 2017
5
December, 2017
2
February, 2018
1
October, 2018
Available data
29
bam
29
bigWig
29
fastq
27
bed narrowPeak
16
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
5
bed bed3+
Organism
29
Homo sapiens
Biosample type
11
cell line
6
tissue
5
in vitro differentiated cells
5
primary cell
2
stem cell
Organ
12
liver
9
pancreas
5
epithelium
embryo
Project
29
AMP
Genome assembly (visualization)
29
hg19
27
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
29
inconsistent control read length
4
inconsistent assembly
1
inconsistent control run_type
organ_slims!
embryo
stomach
target.investigated_as!
chromatin remodeller
transcription factor
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
cell line
HepG2
11
tissue
pancreas
4
body of pancreas
1
liver
1
in vitro differentiated cells
definitive endodermal cell
3
Posterior foregut
1
primitive gut cell
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
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