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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
total RNA-seq
11
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
Assay category
50
Transcription
13
DNA accessibility
Date released
153
May, 2021
47
September, 2023
45
May, 2020
23
February, 2023
19
April, 2020
16
January, 2021
7
March, 2020
5
March, 2023
0
August, 2017
Available data
45
bam
45
bigWig
45
tsv
Organism
68
Homo sapiens
Biosample type
45
primary cell
18
tissue
5
cell line
Organ
18
pancreas
Project
AMP
HPAP
68
T1D
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
68
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
award.project!
AMP
HPAP
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
ATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
snATAC-seq
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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tissue
islet of Langerhans
5
11
2
cell line
EndoC_BH1
3
2
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