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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
10
snATAC-seq
9
total RNA-seq
4
ChIP-seq
Assay category
21
DNA accessibility
9
Transcription
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
18
February, 2023
8
January, 2021
7
March, 2020
1
May, 2021
Available data
6
bam
6
bigWig
4
bed narrowPeak
2
tsv
Organism
34
Homo sapiens
Biosample type
primary cell
30
tissue
4
cell line
Organ
47
kidney
34
pancreas
19
lung
4
epithelium
1
thymus
Project
AMP
34
T1D
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
26
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
award.project!
AMP
biosample_type!
primary cell
files.file_type!
bed bed3+
organ_slims!
nerve
BIOSAMPLE
ASSAY
34 results
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ATAC-seq
snATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
11
6
7
2
pancreas
4
cell line
EndoC_BH1
2
2
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