Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
10
ATAC-seq
Assay category
96
Transcription
84
DNA binding
10
DNA accessibility
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
135
May, 2021
45
May, 2020
7
August, 2020
3
September, 2020
Available data
190
bigWig
180
bam
169
fastq
153
zippedFastqFolder
102
tsv
84
bed narrowPeak
84
tagAlign
4
hic
3
bedpe bed3+
3
cool
Organism
190
Homo sapiens
Biosample type
190
primary cell
Organ
10
epithelium
10
pancreas
Project
180
T1D
AMP
10
HPAP
Genome assembly (visualization)
190
GRCh38
180
hg19
Lab
180
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
award.project!
AMP
lab.title!
AMP-T2D consortium
month_released!
October, 2017
BIOSAMPLE
ASSAY
190 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
84
pancreatic alpha cell
7
pancreatic beta cell
3
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 22 more…
See all biosamples
Download