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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
single cell RNA-seq
12
snATAC-seq
11
ATAC-seq
7
total RNA-seq
2
ChIP-seq
1
pCHi-C
Assay category
63
Transcription
23
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
47
September, 2023
19
April, 2020
18
February, 2023
January, 2021
4
March, 2020
1
May, 2021
Available data
2
bam
2
bed narrowPeak
2
bigWig
Organism
88
Homo sapiens
Biosample type
521
primary cell
89
tissue
11
cell line
2
stem cell
Organ
47
kidney
22
pancreas
19
lung
1
thymus
Project
AMP
47
KPMP
23
T1D
19
LungMap
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
47
KPMP
19
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
4
AMP-T2D consortium
award.project!
AMP
files.file_type!
bed bed3+
lab.title!
Karen Mohlke, UNC
month_released!
January, 2021
BIOSAMPLE
ASSAY
89 results
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single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
tissue
kidney
47
islet of Langerhans
2
11
7
2
lung
9
10
thymus
1
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