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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56single cell RNA-seq
  • 20snATAC-seq
  • 11ATAC-seq
  • 7total RNA-seq
  • 2ChIP-seq
  • 1pCHi-C
Assay category
  • 63Transcription
  • 31DNA accessibility
  • 2DNA binding
Target of assay
  • 2histone
  • 2histone modification
  • 2narrow histone mark
Date released
  • 47September, 2023
  • 19April, 2020
  • 18February, 2023
  • 8January, 2021
  • 4March, 2020
  • 1May, 2021
Available data
  • 2bam
  • 2bed narrowPeak
  • 2bigWig
Organism
  • 96Homo sapiens
Biosample type
  • 529primary cell
  • 97tissue
  • 11cell line
  • 2stem cell
Organ
  • 47kidney
  • 30pancreas
  • 19lung
  • 1thymus
Project
  • AMP
  • 47KPMP
  • 31T1D
  • 19LungMap
Genome assembly (visualization)
  • 2GRCh38
  • 2hg19
Lab
  • 47KPMP
  • 27Kyle Gaulton, UCSD
  • 19Xin Sun, UCSD
  • 4AMP-T2D consortium
award.project!
  • AMP
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97 results

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single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
tissue
kidney47
islet of Langerhans61172
lung910
pancreas4
thymus1
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