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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
12
snATAC-seq
11
ATAC-seq
9
single cell RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
90
Transcription
23
DNA accessibility
Date released
153
May, 2021
134
May, 2022
99
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
Available data
76
fastq
Organism
117
Homo sapiens
Biosample type
76
primary cell
37
tissue
5
cell line
Organ
55
pancreas
37
epithelium
19
lung
Project
AMP
76
HPAP
23
T1D
19
LungMap
Lab
76
Klaus Kaestner, Upenn
23
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
award.project!
AMP
files.file_type!
ibed
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
118 results
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total RNA-seq
snATAC-seq
ATAC-seq
single cell RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
lung
10
9
islet of Langerhans
5
2
11
cell line
EndoC_BH1
3
2
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