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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
2
ChIP-seq
2
total RNA-seq
Assay category
10
DNA accessibility
2
DNA binding
2
Transcription
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
7
August, 2020
3
March, 2020
3
September, 2020
1
May, 2021
Available data
zippedFastqFolder
69
fastq
14
bigWig
8
tsv
4
bam
3
bedpe bed3+
3
cool
3
hic
2
bed narrowPeak
Organism
14
Homo sapiens
Biosample type
10
primary cell
4
cell line
Organ
16
pancreas
14
epithelium
Project
AMP
10
HPAP
4
T1D
Genome assembly (visualization)
14
GRCh38
4
hg19
Lab
10
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
award.project!
AMP
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
ChIP-seq
total RNA-seq
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
cell line
EndoC_BH1
2
2
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