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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
accessible chromatin
48
gene expression
45
candidate regulatory elements
36
target gene predictions
33
differential activity
25
chromatin state
17
binding sites
15
eQTL
11
variant allelic effects
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
68
September, 2022
58
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
12
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
175
bed bed3+
76
tsv
36
bigWig
21
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
301
Homo sapiens
Biosample type
114
tissue
96
cell line
88
primary cell
3
in vitro differentiated cells
Organ
802
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
245
heart
244
limb
239
pancreas
218
bodily fluid
213
embryo
207
blood
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
299
AMP
T1D
ENCODE
2
community
Genome assembly (visualization)
210
hg19
51
GRCh38
award.project!
ENCODE
T1D
organ_slims!
blood vessel
BIOSAMPLE
TYPE
301 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
2
13
1
1
2
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
GM12864
1
2
1
1
2
1
GM12865
1
2
1
1
2
1
MM.1S
1
2
2
1
1
1
GM10248
1
2
1
1
1
+ See 16 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
1
2
pancreatic beta cell
4
3
1
3
1
pancreatic alpha cell
3
3
1
3
1
pancreatic acinar cell
2
3
1
3
1
pancreatic delta cell
2
3
1
3
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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