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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
47
accessible chromatin
41
gene expression
33
differential activity
30
target gene predictions
17
candidate regulatory elements
11
variant allelic effects
10
binding sites
10
chromatin state
8
histone modifications
3
eQTL
2
caQTL
Date released
41
March, 2023
31
September, 2022
30
May, 2021
29
February, 2024
27
February, 2021
20
January, 2021
7
August, 2018
6
October, 2019
5
June, 2020
4
October, 2022
3
May, 2022
2
May, 2020
1
February, 2020
1
February, 2023
1
January, 2020
1
January, 2022
1
June, 2021
1
March, 2020
1
November, 2019
Available data
125
bed bed3+
59
tsv
34
bigWig
14
bigBed narrowPeak
10
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bigBed bed9
Organism
212
Homo sapiens
Biosample type
tissue
149
primary cell
58
cell line
5
in vitro differentiated cells
Organ
761
epithelium
348
kidney
315
connective tissue
214
bodily fluid
204
blood
178
embryo
176
vasculature
169
skin of body
145
pancreas
121
lung
117
blood vessel
117
brain
93
liver
79
mammary gland
68
uterus
66
bone element
63
prostate gland
62
lymph node
62
penis
58
musculature of body
45
extraembryonic component
38
intestine
35
eye
34
large intestine
33
artery
31
heart
22
vein
18
lymphatic vessel
14
bronchus
12
bone marrow
11
placenta
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
190
AMP
ENCODE
20
T1D
2
community
Genome assembly (visualization)
142
hg19
18
GRCh38
award.project!
ENCODE
biosample_type!
tissue
BIOSAMPLE
TYPE
212 results
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Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
candidate regulatory elements
variant allelic effects
binding sites
chromatin state
histone modifications
eQTL
caQTL
primary cell
pancreatic beta cell
6
3
3
3
1
pancreatic ductal cell
4
3
3
2
1
1
2
pancreatic alpha cell
5
3
3
3
1
pancreatic delta cell
4
3
3
3
1
pancreatic acinar cell
3
3
3
2
1
+ See 22 more…
cell line
EndoC_BH1
8
8
3
1
1
LHCN-M2
1
1
2
1
1
1
NT2-D1 cell
1
1
1
2
1
A673
2
2
1
Panc1
2
2
1
+ See 6 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
See all biosamples
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