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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1007
target gene predictions
597
accessible chromatin
478
gene expression
472
differential activity
366
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
81
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
487
September, 2022
456
February, 2021
320
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2405
bed bed3+
612
tsv
188
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3555
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
393
HDMA
376
DGA
330
T1D
320
pyxis
281
KPMP
216
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
81
T2DKP
55
HPAP
45
T2D
40
AMP
35
eQTLCatalogue
26
FNIH_projects-heart
26
T2DKP
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5951
tissue
3600
primary cell
2559
cell line
514
in vitro differentiated cells
4
stem cell
Organ
695
epithelium
466
blood
332
kidney
288
connective tissue
231
brain
195
heart
163
vasculature
161
skin of body
132
pancreas
130
liver
120
blood vessel
69
lung
64
eye
60
__MARKER__
52
adipose tissue
51
musculature of body
46
muscle organ
44
mammary gland
41
penis
40
extraembryonic component
37
artery
35
thymus
24
spleen
21
thyroid gland
20
embryo
20
vein
17
bone element
15
adrenal gland
14
bronchus
14
lymphatic vessel
12
bone marrow
11
prostate gland
9
bodily fluid
9
placenta
7
esophagus
5
skeleton
5
trachea
4
intestine
4
mouth
4
spinal cord
3
uterus
2
gonad
2
stomach
1
limb
1
pericardium
1
testis
Project
3237
AMP
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1508
hg19
1493
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
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ENCODE
BIOSAMPLE
TYPE
3600 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
endothelial cell
11
14
9
25
3
1
2
2
2
3
fibroblast
24
26
10
3
1
6
2
CD8-positive, alpha-beta T cell
26
3
3
7
30
1
T-cell
64
4
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