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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
candidate regulatory elements
62
target gene predictions
8
accessible chromatin
6
binding sites
5
histone modifications
4
chromatin state
3
eQTL
2
gene expression
Date released
103
September, 2022
64
February, 2021
8
June, 2020
6
May, 2021
4
August, 2017
3
February, 2024
3
January, 2022
2
March, 2020
2
March, 2024
1
October, 2022
Available data
191
bed bed3+
bed bed9
2
tsv
Organism
196
Homo sapiens
Biosample type
166
tissue
30
cell line
Organ
782
epithelium
572
kidney
400
brain
377
connective tissue
293
musculature of body
246
pancreas
232
lung
231
vasculature
215
intestine
201
heart
194
limb
193
bodily fluid
186
embryo
184
blood
174
blood vessel
160
skin of body
139
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
74
bone element
67
artery
67
mammary gland
65
prostate gland
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
196
AMP
ENCODE
Genome assembly (visualization)
191
hg19
5
GRCh38
award.project!
ENCODE
files.file_type!
bed bed9
BIOSAMPLE
TYPE
196 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
small intestine
29
17
1
1
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
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