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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
45
target gene predictions
41
chromatin state
9
binding sites
8
accessible chromatin
6
histone modifications
3
gene expression
2
eQTL
1
variant allelic effects
Date released
104
September, 2022
53
February, 2021
8
June, 2020
6
May, 2021
4
August, 2017
3
February, 2024
3
March, 2024
2
January, 2020
2
January, 2022
2
March, 2020
2
October, 2022
1
May, 2020
Available data
148
bed bed3+
37
bed bed9
3
tsv
2
bigBed bed9
bigWig
Organism
190
Homo sapiens
Biosample type
135
tissue
36
cell line
19
primary cell
Organ
734
epithelium
616
kidney
445
brain
395
connective tissue
356
musculature of body
299
lung
270
intestine
237
vasculature
231
heart
230
limb
218
bodily fluid
213
embryo
213
pancreas
207
blood
194
skin of body
181
blood vessel
168
large intestine
143
extraembryonic component
134
liver
110
stomach
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
79
bone element
78
prostate gland
73
eye
71
placenta
66
artery
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
41
esophagus
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
21
thyroid gland
20
lymphatic vessel
19
mouth
13
breast
13
bronchus
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
190
AMP
ENCODE
Genome assembly (visualization)
184
hg19
41
GRCh38
award.project!
ENCODE
files.file_type!
bigWig
BIOSAMPLE
TYPE
190 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
2
1
RKO
1
1
1
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
1
1
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