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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1684
candidate regulatory elements
1234
target gene predictions
975
histone modifications
814
binding sites
677
accessible chromatin
122
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2391
February, 2021
1656
September, 2022
291
February, 2024
285
May, 2021
284
June, 2020
135
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
39
May, 2024
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5581
bed bed3+
897
tsv
858
bed bed9
324
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5535
Homo sapiens
Biosample type
2119
cell line
1813
tissue
1296
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
430
epithelium
309
brain
306
kidney
288
connective tissue
270
musculature of body
230
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
165
heart
160
vasculature
155
skin of body
141
pancreas
131
large intestine
120
blood vessel
109
extraembryonic component
98
liver
94
eye
84
stomach
74
uterus
69
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
esophagus
29
spinal cord
26
spleen
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
lymphatic vessel
14
nerve
13
mouth
12
bronchus
11
pituitary gland
10
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5501
AMP
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5573
hg19
506
GRCh38
1
hg18
award.project!
ENCODE
organ_slims!
esophagus
testis
BIOSAMPLE
TYPE
5581 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 759 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 213 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
3
CD14-positive monocyte
8
19
+ See 271 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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