Annotation Matrix – Common Metabolic Diseases Genome Atlas

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

BIOSAMPLE

	TYPE
7735 results Clear Filters	target gene predictions	candidate regulatory elements	accessible chromatin	histone modifications	binding sites	eQTL	variant allelic effects	chromatin state	caQTL	hQTL	meQTL	other	pQTL	variant to gene	sQTL
tissue
stomach	42	40	3	1		1
head of caudate nucleus	86
heart	38	37	5	1	1		2
kidney	28	29	10	2	1	1	1
brain	30	29	2	3	1	2	1

primary cell
monocyte	2		18	86	1	3				1	1
T-cell	64	4
CD8-positive, alpha-beta T cell	26	7	3	30
fibroblast	24	3	26		1	2	6
CD4-positive, alpha-beta T cell	51	8

cell line
HeLa-S3	59	5			1
A549	33	21	1	1	2
H1-hESC	39	1	1	1	2
K562	30	7	1	1	2			1
MCF-7	13	9	1	2	3

in vitro differentiated cells
hematopoietic multipotent progenitor cell	22	19	1	1	1
neural progenitor cell	6	5	10	14
adipocyte	7	4	4	1	1			4
mesenchymal stem cell	4	3	1	1	1
neuronal stem cell	2	2	1	2	2

stem cell
H1-hESC								1
mesenchymal stem cell	1
mesendoderm	1
undifferentiated ESC (H9 cell line)	1