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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
622
gene expression
291
accessible chromatin
158
differential activity
63
Fine-mapped variants
24
eQTL
4
variant allelic effects
3
target gene predictions
2
variant to gene
1
chromatin state
1
representative DNase hypersensitivity sites
Date released
281
September, 2023
189
February, 2021
100
May, 2021
96
February, 2024
71
January, 2020
70
March, 2020
61
August, 2021
57
March, 2023
53
May, 2020
40
February, 2020
29
March, 2024
28
January, 2021
19
April, 2020
19
February, 2023
11
November, 2022
9
November, 2019
8
October, 2019
7
May, 2022
4
January, 2022
4
September, 2022
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
July, 2020
1
June, 2021
1
May, 2019
Available data
5246
bed bed3+
870
tsv
800
bed bed9
308
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
1124
Homo sapiens
Biosample type
770
primary cell
289
tissue
86
in vitro differentiated cells
24
cell line
Organ
413
epithelium
284
kidney
122
pancreas
88
brain
88
connective tissue
86
vasculature
63
blood vessel
heart
38
liver
34
eye
31
limb
27
adipose tissue
25
artery
22
musculature of body
13
bone element
10
embryo
8
nerve
8
skeleton
6
lymphatic vessel
5
spinal cord
4
lung
3
intestine
3
ureter
2
esophagus
2
gonad
2
large intestine
2
skin of body
2
spleen
2
stomach
2
uterus
2
vein
1
adrenal gland
blood
1
bodily fluid
1
bone marrow
1
breast
1
bronchus
1
lymphoid tissue
1
mouth
1
ovary
1
pituitary gland
1
prostate gland
1
testis
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
Project
839
AMP
281
KPMP
ENCODE
28
T1D
19
LungMap
2
community
Genome assembly (visualization)
383
hg19
229
GRCh38
award.project!
ENCODE
organ_slims!
blood
heart
BIOSAMPLE
TYPE
1169 results
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Clear Filters
gene expression
accessible chromatin
differential activity
Fine-mapped variants
eQTL
variant allelic effects
target gene predictions
variant to gene
chromatin state
representative DNase hypersensitivity sites
primary cell
monocyte
15
16
epithelial cell of proximal tubule
15
1
hepatocyte
9
6
glomerular endothelial cell
13
1
pancreatic beta cell
2
5
3
1
1
+ See 214 more…
tissue
retina
1
16
1
kidney
7
9
1
islet of Langerhans
9
4
2
pigmented layer of retina
13
subcutaneous adipose tissue
5
2
1
3
1
+ See 100 more…
in vitro differentiated cells
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
neural progenitor cell
7
+ See 24 more…
cell line
EndoC_BH1
8
1
1
H1-hESC
8
HepG2
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
+ See 3 more…
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