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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
10
histone modifications
8
accessible chromatin
8
eQTL
6
binding sites
3
Fine-mapped variants
2
gene expression
1
caQTL
1
differential activity
1
variant allelic effects
Date released
40
September, 2022
20
February, 2021
7
August, 2021
6
March, 2020
4
June, 2020
3
August, 2017
2
February, 2020
January, 2020
2
May, 2021
2
May, 2022
1
February, 2024
1
January, 2022
1
May, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
65
bed bed3+
12
bed bed9
7
tsv
3
bigWig
1
bam
1
bigBed bed9
Organism
93
Homo sapiens
Biosample type
57
tissue
28
cell line
8
primary cell
Organ
epithelium
635
kidney
437
brain
408
connective tissue
359
musculature of body
302
lung
270
intestine
255
pancreas
247
vasculature
237
limb
235
heart
218
bodily fluid
213
embryo
207
blood
194
skin of body
190
blood vessel
168
large intestine
150
liver
143
extraembryonic component
110
stomach
103
eye
88
bone element
85
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
artery
71
placenta
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
42
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
24
nerve
21
lymphatic vessel
21
ovary
21
thyroid gland
21
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
93
AMP
ENCODE
Genome assembly (visualization)
86
hg19
25
GRCh38
2
hg18
award.project!
ENCODE
month_released!
January, 2020
organ_slims!
epithelium
BIOSAMPLE
TYPE
93 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
eQTL
binding sites
Fine-mapped variants
gene expression
caQTL
differential activity
variant allelic effects
tissue
liver
13
10
9
2
4
7
1
1
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
3
2
5
2
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
1
1
1
1
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